如data.frame为：zz, 绘图如下：
a. single protein：线性回归画法
1. ggplot(zz,aes(x=a, y=HDL))+
geom_point(alpha=1,colour="#FFA54F")+
geom_smooth(method = lm,colour="#8B658B")+
#scale_color_brewer(palette = "Set1")+
theme_bw()+
labs(x="Ferritin",y="HDL.C",title="Pearson’s correlation test of ferritin and HDL.C")+
annotate("text", x = 1000, y = 2.5, label = "r = -0.51",colour="black",size=4)
2. library(ggstatsplot)
ggscatterstats(data = alldata,
y = TRANSFUSION.UNIT,
x = NPTXR,
centrality.para = "mean", #"mean" or "median"
margins = "both",
xfill = "#D8BFD8",
yfill = "#EEDD82",
#line.size= ,
line.color="#8B6969",
point.color="#2F4F4F",
marginal.size=4,
marginal.type = "density", # "histogram", "boxplot", "density", "violin", "densigram")
title = "Relationship between TRANSFUSION.UNIT and NPTXR")
b. ggcorrplot, 全部蛋白 global correlation map 画法
ggcorrplot(cor(alldata))
2. summary(lm(y~x),method=" ") %>%.[["coefficients"]] 正规线性回归
(其实就是：a<-lm(y~x1+x2+...,data)
plot(summary(lm(y~x),method=" ")) #绘图
3. ggcor部分数据绘图: 数据类型为data.frame，纵坐标为各指标or各蛋白，行为观测值。
data <- fortify_cor(alldata[,10:11],alldata,cluster.type = "col")
ggcor<-ggcor(data,label_size=0.5) +
geom_colour()+
theme(axis.text.x = element_text(colour = "black",size = 4.7),
axis.text.y=element_text(size=5.5),
axis.ticks=element_blank())+
geom_num(aes(num=r),colour="black",size=1.5)
4. corrr包画法
datasets::mtcars %>%
correlate() %>%
focus(-cyl, -vs, mirror = TRUE) %>%
rearrange() %>%
network_plot(min_cor = .2)
给你一些代码，你慢慢研究：install.packages('ggplot2')
library(ggplot2)
ggplot(a)+geom_bar(aes(x1,y,fill/col=x1/x2),position='dodge',stat='summary',fun='sum'/'mean')条形图+theme(text = element_text(family='Kai'))
ggplot(a)+geom_boxplot(aes(x1,y,col=x1/x2))箱线图
ggplot(a)+geom_point(aes(x1,y,col=x1/x2),position=position_jitter(width=0.04))散点图
1+geom_point(aes(x1,y,col=x1/x2),stat='summary',fun='sum'/'mean')+散点
2+geom_line(aes(x1,y,group=1/x2,col=x1/x2),stat='summary',fun='sum'/'mean')+折线
3+geom_errorbar(aes(x=x1,ymin=y-se,ymax=y+se,col=x1/x2),position=position_dodge(0.9),width=0.2)+误差棒
4+geom_text(aes(x1,y,label=marker,col=x1/x2),position=position_dodge(0.9)vjust=2或y+2)+显著字母
ggplot(a,aes(x1,y,fill/col=x1/x2))+geom_bar(position='dodge',stat='summary',fun='sum'/'mean')+geom_errorbar(aes(ymin=y-se,ymax=y+se),position=position_dodge(0.9),width=0.2)+geom_text(aes(label=marker),position=position_dodge(0.9),vjust=-2)条形图+误差棒+显著字母（坐标写一次即可）
ggplot(a,aes(x1,y,col=x1/x2))+geom_point(position=position_jitter(width=0.04),stat='summary',fun='sum'/'mean')+geom_line(aes(group=1/x2),stat='summary',fun='sum'/'mean')+geom_errorbar(aes(ymin=y-se,ymax=y+se),position=position_dodge(0.9),width=0.2)+geom_text(aes(label=marker),position=position_dodge(0.9),vjust=-2)散点图+折线+误差棒+显著字母（坐标写一次即可）
+geom_density(aes(y=liqi))密度图(1个数值型)
+geom_area(aes(x=tan,y=liqi))区域图(2个数值型)
+geom_smooth(aes(x=tan,y=liqi,group/col=chong),formula=y~x,method='lm',se=F)拟合图，分组/线条颜色(2个数值型)
+facet_wrap(~riqi,ncol/nrow=2,labeller='label_both/value')分面图，每行或每列分面数，分面标题
+xlab('自变量1（单位）')+ylab('因变量（单位）')+scale_fill_discrete(name='自变量2')更改轴和图例名称+coord_cartesian(ylim= c(0,80))限定轴范围
(fill=x1/x2,有此即可变色)+scale_fill_manual(values = c('grey70', 'grey50', 'grey30'))改变条形填充颜色(颜色数量=分组数量)
(col=x1/x2,有此即可变色)+scale_color_manual(values = c('red', 'orange', 'yellow'))改变颜色（颜色数量=分组数量）
1、利用geom_smooth进行曲线的拟合。2、利用spline进行插值操作。R语言，一种自由软件编程语言与操作环境，主要用于统计分析、绘图、数据挖掘。R主要是以命令行操作，同时有人开发了几种图形用户界面。
